Transformation using protoplasts

ID: 7

Group:

Fungal Molecular Biology

Prepared by:

Dr Christophe d’Enfert and Pieternella Mol

Detail:

This procedure allows transformation of A. fumigatus with efficiencies averaging 200 transformants/µg DNA. Efficiencies up to 1000 transformants/µg have been observed. It is adapted from the protocol of O. Sanchez and J. Aguirre developed for A. nidulans.

Year prepared: 1999

Date uploaded: 2010-02-26 13:39:44

Introduction

The following transformation protocol is based on resistant markers (e.g. hygromycinB, phleomycin) and is suited for gene disruption by targeted integration. 5-10 transformants/ µg DNA are obtained and about 10 % of the integration events occur at the homologous site. This procedure is derived from the methods of Tilburn et al . (1983) and Mallardier et al. (1989). 

Materials

  • MM (Minimal medium) : glucose, 10 g ; ammonium tartrate 0.92 g ; KCl, 0.52 g ; Mg S0 4 , 7H 2 0, 0.52 g ; KH 2 PO 4, 1.52 g ; trace elements solution (Cove, 1966) 1 ml ; H 2 0 1l ; pH adjusted to 6.8 with Na0H. Autoclave 30 min at 105°C.
  • MMS : Minimal medium with 1M saccharose and 1 % oxoid agar (Unipath, England). Autoclave 30 min. at 105°C. 
  • Soft agar : MMS with 0.35 % oxoid agar. Autoclave 30 min at 105°C. 
  • MS : 1M sorbitol in 10 mM MOPS buffer pH 6.5. Filtrate on 0.45 µm filter. 
  • MSC : MS with 10 mM CaCl 2. Filtrate on 0.45 µm filter. 
  • PEG 60 % (w/v) : PEG 4000 or 6000 (Merck) in MSC. Filtrate on 0.45 µm 

Equipment

  • 50°C water bath
  • Microman pipettor (Gilson)
  • Microcentrifuge

Procedure

  1. Wash the pellet of protoplasts (see above protocol) twice in MSC and resuspend in MSC to get 5 to 25.10 7 protoplasts/ml.
  2. In a 1,5 ml microcentrifuge tube mix 200 µl of the protoplast suspension (1.10 7 protoplasts) and 5-20 µl of TE containing 1-5 µg of transforming DNA (linear fragment).
  3. Using a special pipettor for viscous solutions add 50 µl of 60 % PEG. Gently homogenize by pipeting up and down. Incubate 20 min (or more) on ice.
  4. Add 500 µl of 60 % PEG, homogenize by pipeting up and down. Incubate 20 min at room temperature.
  5. Microcentrifuge 5 min at room temperature at 13.000 rpm. Take off the PEG. The protoplasts stick to the wall of the tube. Microcentrifuge 1 min more to pellet the protoplasts, take off the remaining PEG.
  6. Resuspend the protoplasts in 200 µl MSC, tranfer in 4 ml sterile plastic tube, add 3 ml of soft agar MMS and spread onto MMS plates. After agar solidification, incubate at room temperature overnight for the expression of the HygromycineB R or Phleomycin R gene.
  7. The following day, add 3ml of soft agar MM containing Hygromycin B (200 µg/ml) or phleomycin (20 µg/ml) and incubate until transformants appear.
  8. Growing colonies are replicated with a toothpick on selective medium (MM+HmB or phleo) and then single colonies corresponding to the growth of an uninucleate conidium are isolated.
  9. Southern blot hybridization analysis of the stable HmB R /Phleo R colonies determinates which transformants have integrated the disrupted gene at the homologous site.

Timetable

Day 1 Fungal culture Overnight/18 hour
Day 2 Protoplast production
Transformation		 2 – 3 hours
2 hours
Day 3 Overlay of selective medium  

Tips and general comments

  1. Germinated spores give more competent protoplasts than hyphae. Protoplasts isolated from hyphae vary in size and organelle constitution and have low regeneration rates.
  2. Quicker are made the protoplasts, more competent they are. Protoplast formation should not exceed 90 min.
  3. The hydrolytic enzymes present in crude enzyme preparation (Glucanex or Novozyme) vary from batch to batch and its concentration should be tested before starting the transformation experiment. Fincham (1989) reported that depending on the batch of enzyme the frequency of transformants may slump 100 fold with Neurospora crassa.
  4. For each transformation experiment, at least 1.10 7 protoplasts are needed. If fewer protoplasts are used , the frequency of transformants decreases.

Additional Information Provided By Raquel Lopez

When overlaying protoplast suspension slide buffer slowly down side of tube.
Protoplasts appear as a very dusty whitish interface
Use MSC to make dilutions for counting cells, not water.

References

Cove, D.J. (1966). The induction and repression of nitrate reductase in the fungus Aspergillus nidulans . Biochem. Biophys. Acta, 113:51-56.

Fincham (1989). Transformation in fungi. Microbiological Reviews, 53:148-170.

Malardier L., Daboussi M.J., Julien J., Roussel F., Scazzocchio C. and Brygoo Y.(1989). Cloning of the nitrate reductase gene (niaD) of Aspergillus nidulans and its use for transformation of Fusarium oxysporum . Gene, 78:147-156.

Tilburn J., Scazzocchio C., Taylor G.G., Zabicky-Zissman J.H., Lockington R.A., and Davies R.W. (1983). Transformation by integration in Aspergillus nidulans . Gene, 26:205-221.

Laboratory Protocols